<?xml version="1.0"?>
<Articles JournalTitle="Iranian Journal of Microbiology">
  <Article>
    <Journal>
      <PublisherName>Tehran University of Medical Sciences</PublisherName>
      <JournalTitle>Iranian Journal of Microbiology</JournalTitle>
      <Issn>2008-3289</Issn>
      <Volume>18</Volume>
      <Issue>5</Issue>
      <PubDate PubStatus="epublish">
        <Year>2026</Year>
        <Month>10</Month>
        <Day>05</Day>
      </PubDate>
    </Journal>
    <title locale="en_US">Distribution of gram-negative bacteria in lower respiratory tract infections and their susceptibility patterns to beta-lactam antibiotics during the COVID-19 pandemic</title>
    <FirstPage>718</FirstPage>
    <LastPage>728</LastPage>
    <AuthorList>
      <Author>
        <FirstName>Conny</FirstName>
        <LastName>Tjampakasari</LastName>
        <affiliation locale="en_US">Department of Microbiology, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia</affiliation>
      </Author>
      <Author>
        <FirstName>Reyhan</FirstName>
        <LastName>Afif Sucahyo</LastName>
        <affiliation locale="en_US">Department of Medical Education, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia</affiliation>
      </Author>
      <Author>
        <FirstName>Dimas</FirstName>
        <LastName>Seto Prasetyo</LastName>
        <affiliation locale="en_US">Department of Microbiology, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia</affiliation>
      </Author>
    </AuthorList>
    <History>
      <PubDate PubStatus="received">
        <Year>2026</Year>
        <Month>05</Month>
        <Day>13</Day>
      </PubDate>
      <PubDate PubStatus="accepted">
        <Year>2026</Year>
        <Month>08</Month>
        <Day>07</Day>
      </PubDate>
    </History>
    <abstract locale="en_US">Background and Objectives: Inappropriate antibiotic use can lead to resistance, particularly in Gram-negative bacteria. The aimd of this study was to identify the distribution of Gram-negative bacteria responsible for lower respiratory tract infections and to assess their susceptibility profiles to beta-lactam antibiotics in the periods before and during the COVID-19 pandemic.
Materials and Methods: This retrospective cross-sectional study utilized secondary data from WHONET 2022, drawing on a database of Gram-negative bacteria isolated from lower respiratory tract specimens processed at the Clinical Microbiology Laboratory, Faculty of Medicine, Universitas Indonesia, during the period of 2018-2021. Susceptibility to ampicillin-sulbactam, ceftazidime, cefepime, meropenem, and piperacillin-tazobactam was assessed. Comparisons between the pre-pandemic and pandemic periods were conducted using the chi-square test.
Results: A total of 569 samples were analyzed, comprising 383 samples from the pre-pandemic period (2018-2019) and 186 samples from the COVID-19 pandemic period (2020-2021). Twenty-nine Gram-negative bacterial species were identified before the pandemic, compared with 19 species during the COVID-19 pandemic. Klebsiella pneumoniae emerged as the most common pathogen, with a prevalance of 30.29% before and 27.96% during the COVID-19 pandemic. Statistical analysis revealed significant differences in the resistance patterns of Acinetobacter baumannii to cefepime (p= 0.036), ceftazidime (p= 0.018), and piperacillin-tazobactam (p= 0.002). Conversely, no significant differences were observed for K. pneumoniae and Pseudomonas aeruginosa (p &gt; 0.05).
Conclusion: K. Pneumoniae remains the predominant Gram-negative pathogen causing lower respiratory tract infections, whereas A. baumannii shows an increased disease burden and resistance during the COVID-19 pandemic. This underscores the importance of continuous surveillance of antimicrobial resistance.</abstract>
    <web_url>https://ijm.tums.ac.ir/index.php/ijm/article/view/6191</web_url>
    <pdf_url>https://ijm.tums.ac.ir/index.php/ijm/article/download/6191/1933</pdf_url>
  </Article>
</Articles>
